The ecoregions of Madagascar, as defined by the World Wildlife Fund, include seven terrestrial, five freshwater, and two marine ecoregions. Madagascar's diverse natural habitats harbour a rich fauna and flora with high levels of endemism, but most ecoregions suffer from habitat loss.

The Afrotropical realm is one of the Earth's eight biogeographic realms. It includes Sub-Saharan Africa, the southern Arabian Peninsula, the island of Madagascar, and the islands of the western Indian Ocean. It was formerly known as the Ethiopian Zone or Ethiopian Region.