Fossilworks is a portal which provides query and analysis tools to facilitate access to the Paleobiology Database, a large relational database assembled by hundreds of paleontologists from around the world. Fossilworks is housed at Macquarie University, it includes many analysis and data visualization tools included in the Paleobiology Database. "Fossilworks". Retrieved 2010-04-08
A fossil is any preserved remains, impression, or trace of any once-living thing from a past geological age. Examples include bones, exoskeletons, stone imprints of animals or microbes, objects preserved in amber, petrified wood, coal, DNA remnants; the totality of fossils is known as the fossil record. Paleontology is the study of fossils: their age, method of formation, evolutionary significance. Specimens are considered to be fossils if they are over 10,000 years old; the oldest fossils are around 3.48 billion years old to 4.1 billion years old. The observation in the 19th century that certain fossils were associated with certain rock strata led to the recognition of a geological timescale and the relative ages of different fossils; the development of radiometric dating techniques in the early 20th century allowed scientists to quantitatively measure the absolute ages of rocks and the fossils they host. There are many processes that lead to fossilization, including permineralization and molds, authigenic mineralization and recrystallization, adpression and bioimmuration.
Fossils vary in size from one-micrometre bacteria to dinosaurs and trees, many meters long and weighing many tons. A fossil preserves only a portion of the deceased organism that portion, mineralized during life, such as the bones and teeth of vertebrates, or the chitinous or calcareous exoskeletons of invertebrates. Fossils may consist of the marks left behind by the organism while it was alive, such as animal tracks or feces; these types of fossil are called trace ichnofossils, as opposed to body fossils. Some fossils are called chemofossils or biosignatures; the process of fossilization varies according to external conditions. Permineralization is a process of fossilization; the empty spaces within an organism become filled with mineral-rich groundwater. Minerals precipitate from the groundwater; this process can occur in small spaces, such as within the cell wall of a plant cell. Small scale permineralization can produce detailed fossils. For permineralization to occur, the organism must become covered by sediment soon after death, otherwise decay commences.
The degree to which the remains are decayed when covered determines the details of the fossil. Some fossils consist only of skeletal teeth; this is a form of diagenesis. In some cases, the original remains of the organism dissolve or are otherwise destroyed; the remaining organism-shaped hole in the rock is called an external mold. If this hole is filled with other minerals, it is a cast. An endocast, or internal mold, is formed when sediments or minerals fill the internal cavity of an organism, such as the inside of a bivalve or snail or the hollow of a skull; this is a special form of mold formation. If the chemistry is right, the organism can act as a nucleus for the precipitation of minerals such as siderite, resulting in a nodule forming around it. If this happens before significant decay to the organic tissue fine three-dimensional morphological detail can be preserved. Nodules from the Carboniferous Mazon Creek fossil beds of Illinois, USA, are among the best documented examples of such mineralization.
Replacement occurs. In some cases mineral replacement of the original shell occurs so and at such fine scales that microstructural features are preserved despite the total loss of original material. A shell is said to be recrystallized when the original skeletal compounds are still present but in a different crystal form, as from aragonite to calcite. Compression fossils, such as those of fossil ferns, are the result of chemical reduction of the complex organic molecules composing the organism's tissues. In this case the fossil consists of original material, albeit in a geochemically altered state; this chemical change is an expression of diagenesis. What remains is a carbonaceous film known as a phytoleim, in which case the fossil is known as a compression. However, the phytoleim is lost and all that remains is an impression of the organism in the rock—an impression fossil. In many cases, however and impressions occur together. For instance, when the rock is broken open, the phytoleim will be attached to one part, whereas the counterpart will just be an impression.
For this reason, one term covers the two modes of preservation: adpression. Because of their antiquity, an unexpected exception to the alteration of an organism's tissues by chemical reduction of the complex organic molecules during fossilization has been the discovery of soft tissue in dinosaur fossils, including blood vessels, the isolation of proteins and evidence for DNA fragments. In 2014, Mary Schweitzer and her colleagues reported the presence of iron particles associated with soft tissues recovered from dinosaur fossils. Based on various experiments that studied the interaction of iron in haemoglobin with blood vessel tissue they proposed that solution hypoxia coupled with iron chelation enhances the stability and preservation of soft tissue and provides the basis for an explanation for the unforeseen preservation of fossil soft tissues. However, a older study based on eight taxa ranging in time from the Devonian to the Jurassic found that reasonably well-preserved fibrils that represent collagen were preser
In biology, a species is the basic unit of classification and a taxonomic rank of an organism, as well as a unit of biodiversity. A species is defined as the largest group of organisms in which any two individuals of the appropriate sexes or mating types can produce fertile offspring by sexual reproduction. Other ways of defining species include their karyotype, DNA sequence, behaviour or ecological niche. In addition, paleontologists use the concept of the chronospecies since fossil reproduction cannot be examined. While these definitions may seem adequate, when looked at more they represent problematic species concepts. For example, the boundaries between related species become unclear with hybridisation, in a species complex of hundreds of similar microspecies, in a ring species. Among organisms that reproduce only asexually, the concept of a reproductive species breaks down, each clone is a microspecies. All species are given a two-part name, a "binomial"; the first part of a binomial is the genus.
The second part is called the specific epithet. For example, Boa constrictor is one of four species of the genus Boa. None of these is satisfactory definitions, but scientists and conservationists need a species definition which allows them to work, regardless of the theoretical difficulties. If species were fixed and distinct from one another, there would be no problem, but evolutionary processes cause species to change continually, to grade into one another. Species were seen from the time of Aristotle until the 18th century as fixed kinds that could be arranged in a hierarchy, the great chain of being. In the 19th century, biologists grasped. Charles Darwin's 1859 book The Origin of Species explained how species could arise by natural selection; that understanding was extended in the 20th century through genetics and population ecology. Genetic variability arises from mutations and recombination, while organisms themselves are mobile, leading to geographical isolation and genetic drift with varying selection pressures.
Genes can sometimes be exchanged between species by horizontal gene transfer. Viruses are a special case, driven by a balance of mutation and selection, can be treated as quasispecies. Biologists and taxonomists have made many attempts to define species, beginning from morphology and moving towards genetics. Early taxonomists such as Linnaeus had no option but to describe what they saw: this was formalised as the typological or morphological species concept. Ernst Mayr emphasised reproductive isolation, but this, like other species concepts, is hard or impossible to test. Biologists have tried to refine Mayr's definition with the recognition and cohesion concepts, among others. Many of the concepts are quite similar or overlap, so they are not easy to count: the biologist R. L. Mayden recorded about 24 concepts, the philosopher of science John Wilkins counted 26. Wilkins further grouped the species concepts into seven basic kinds of concepts: agamospecies for asexual organisms biospecies for reproductively isolated sexual organisms ecospecies based on ecological niches evolutionary species based on lineage genetic species based on gene pool morphospecies based on form or phenotype and taxonomic species, a species as determined by a taxonomist.
A typological species is a group of organisms in which individuals conform to certain fixed properties, so that pre-literate people recognise the same taxon as do modern taxonomists. The clusters of variations or phenotypes within specimens would differentiate the species; this method was used as a "classical" method of determining species, such as with Linnaeus early in evolutionary theory. However, different phenotypes are not different species. Species named in this manner are called morphospecies. In the 1970s, Robert R. Sokal, Theodore J. Crovello and Peter Sneath proposed a variation on this, a phenetic species, defined as a set of organisms with a similar phenotype to each other, but a different phenotype from other sets of organisms, it differs from the morphological species concept in including a numerical measure of distance or similarity to cluster entities based on multivariate comparisons of a reasonably large number of phenotypic traits. A mate-recognition species is a group of sexually reproducing organisms that recognize one another as potential mates.
Expanding on this to allow for post-mating isolation, a cohesion species is the most inclusive population of individuals having the potential for phenotypic cohesion through intrinsic cohesion mechanisms. A further development of the recognition concept is provided by the biosemiotic concept of species. In microbiology, genes can move even between distantly related bacteria extending to the whole bacterial domain; as a rule of thumb, microbiologists have assumed that kinds of Bacteria or Archaea with 16S ribosomal RNA gene sequences more similar than 97% to each other need to be checked by DNA-DNA hybridisation to decide if they belong to the same species or not. This concept was narrowed in 2006 to a similarity of 98.7%. DNA-DNA hybri
Insects or Insecta are hexapod invertebrates and the largest group within the arthropod phylum. Definitions and circumscriptions vary; as used here, the term Insecta is synonymous with Ectognatha. Insects have a chitinous exoskeleton, a three-part body, three pairs of jointed legs, compound eyes and one pair of antennae. Insects are the most diverse group of animals; the total number of extant species is estimated at between ten million. Insects may be found in nearly all environments, although only a small number of species reside in the oceans, which are dominated by another arthropod group, crustaceans. Nearly all insects hatch from eggs. Insect growth is constrained by the inelastic exoskeleton and development involves a series of molts; the immature stages differ from the adults in structure and habitat, can include a passive pupal stage in those groups that undergo four-stage metamorphosis. Insects that undergo three-stage metamorphosis lack a pupal stage and adults develop through a series of nymphal stages.
The higher level relationship of the insects is unclear. Fossilized insects of enormous size have been found from the Paleozoic Era, including giant dragonflies with wingspans of 55 to 70 cm; the most diverse insect groups appear to have coevolved with flowering plants. Adult insects move about by walking, flying, or sometimes swimming; as it allows for rapid yet stable movement, many insects adopt a tripedal gait in which they walk with their legs touching the ground in alternating triangles, composed of the front & rear on one side with the middle on the other side. Insects are the only invertebrates to have evolved flight, all flying insects derive from one common ancestor. Many insects spend at least part of their lives under water, with larval adaptations that include gills, some adult insects are aquatic and have adaptations for swimming; some species, such as water striders, are capable of walking on the surface of water. Insects are solitary, but some, such as certain bees and termites, are social and live in large, well-organized colonies.
Some insects, such as earwigs, show maternal care, guarding their eggs and young. Insects can communicate with each other in a variety of ways. Male moths can sense the pheromones of female moths over great distances. Other species communicate with sounds: crickets stridulate, or rub their wings together, to attract a mate and repel other males. Lampyrid beetles communicate with light. Humans regard certain insects as pests, attempt to control them using insecticides, a host of other techniques; some insects damage crops by feeding on sap, fruits, or wood. Some species are parasitic, may vector diseases; some insects perform complex ecological roles. Insect pollinators are essential to the life cycle of many flowering plant species on which most organisms, including humans, are at least dependent. Many insects are considered ecologically beneficial as predators and a few provide direct economic benefit. Silkworms produce silk and honey bees produce honey and both have been domesticated by humans.
Insects are consumed as food in 80% of the world's nations, by people in 3000 ethnic groups. Human activities have effects on insect biodiversity; the word "insect" comes from the Latin word insectum, meaning "with a notched or divided body", or "cut into", from the neuter singular perfect passive participle of insectare, "to cut into, to cut up", from in- "into" and secare "to cut". A calque of Greek ἔντομον, "cut into sections", Pliny the Elder introduced the Latin designation as a loan-translation of the Greek word ἔντομος or "insect", Aristotle's term for this class of life in reference to their "notched" bodies. "Insect" first appears documented in English in 1601 in Holland's translation of Pliny. Translations of Aristotle's term form the usual word for "insect" in Welsh, Serbo-Croatian, etc; the precise definition of the taxon Insecta and the equivalent English name "insect" varies. In the broadest circumscription, Insecta sensu lato consists of all hexapods. Traditionally, insects defined in this way were divided into "Apterygota" —the wingless insects—and Pterygota—the winged insects.
However, modern phylogenetic studies have shown that "Apterygota" is not monophyletic, so does not form a good taxon. A narrower circumscription restricts insects to those hexapods with external mouthparts, comprises only the last three groups in the table. In this sense, Insecta sensu stricto is equivalent to Ectognatha. In the narrowest circumscription, insects are restricted to hexapods that are either winged or descended from winged ancestors. Insecta sensu strictissimo is equivalent to Pterygota. For the purposes of this article, the middle definition is used; the evolutionary relationship of insects to other animal groups remains unclear. Although traditionally grouped with millipedes and centiped
In nutrition, diet is the sum of food consumed by a person or other organism. The word diet implies the use of specific intake of nutrition for health or weight-management reasons. Although humans are omnivores, each culture and each person holds some food preferences or some food taboos; this may be due to ethical reasons. Individual dietary choices may be less healthy. Complete nutrition requires ingestion and absorption of vitamins, essential amino acids from protein and essential fatty acids from fat-containing food food energy in the form of carbohydrate and fat. Dietary habits and choices play a significant role in the quality of life and longevity; some cultures and religions have restrictions concerning. For example, only Kosher foods are permitted by Judaism, Halal foods by Islam. Although Buddhists are vegetarians, the practice varies and meat-eating may be permitted depending on the sects. In Hinduism, vegetarianism is the ideal. Jains are vegetarian and consumption of roots is not permitted.
Many people choose to forgo food from animal sources to varying degrees for health reasons, issues surrounding morality, or to reduce their personal impact on the environment, although some of the public assumptions about which diets have lower impacts are known to be incorrect. Raw foodism is another contemporary trend; these diets may require tuning or supplementation such as vitamins to meet ordinary nutritional needs. A particular diet may be chosen to seek weight gain. Changing a subject's dietary intake, or "going on a diet", can change the energy balance and increase or decrease the amount of fat stored by the body; some foods are recommended, or altered, for conformity to the requirements of a particular diet. These diets are recommended in conjunction with exercise. Specific weight loss programs can be harmful to health, while others may be beneficial and can thus be coined as healthy diets; the terms "healthy diet" and "diet for weight management" are related, as the two promote healthy weight management.
Having a healthy diet is a way to prevent health problems, will provide the body with the right balance of vitamins and other nutrients. An eating disorder is a mental disorder, it is defined by abnormal eating habits that may involve either excessive diet. A healthy diet may maintain optimal health. In developed countries, affluence enables unconstrained caloric intake and inappropriate food choices. Health agencies recommend that people maintain a normal weight by limiting consumption of energy-dense foods and sugary drinks, eating plant-based food, limiting consumption of red and processed meat, limiting alcohol intake; the Dietary Guidelines for Americans is an evidence-based information source that policy makers and health professionals use to advise the general public about healthy nutrition. Diet food Dieting Dessert crop Nutrition psychology The dictionary definition of diet at Wiktionary
Animals are multicellular eukaryotic organisms that form the biological kingdom Animalia. With few exceptions, animals consume organic material, breathe oxygen, are able to move, can reproduce sexually, grow from a hollow sphere of cells, the blastula, during embryonic development. Over 1.5 million living animal species have been described—of which around 1 million are insects—but it has been estimated there are over 7 million animal species in total. Animals range in length from 8.5 millionths of a metre to 33.6 metres and have complex interactions with each other and their environments, forming intricate food webs. The category includes humans, but in colloquial use the term animal refers only to non-human animals; the study of non-human animals is known as zoology. Most living animal species are in the Bilateria, a clade whose members have a bilaterally symmetric body plan; the Bilateria include the protostomes—in which many groups of invertebrates are found, such as nematodes and molluscs—and the deuterostomes, containing the echinoderms and chordates.
Life forms interpreted. Many modern animal phyla became established in the fossil record as marine species during the Cambrian explosion which began around 542 million years ago. 6,331 groups of genes common to all living animals have been identified. Aristotle divided animals into those with those without. Carl Linnaeus created the first hierarchical biological classification for animals in 1758 with his Systema Naturae, which Jean-Baptiste Lamarck expanded into 14 phyla by 1809. In 1874, Ernst Haeckel divided the animal kingdom into the multicellular Metazoa and the Protozoa, single-celled organisms no longer considered animals. In modern times, the biological classification of animals relies on advanced techniques, such as molecular phylogenetics, which are effective at demonstrating the evolutionary relationships between animal taxa. Humans make use of many other animal species for food, including meat and eggs. Dogs have been used in hunting, while many aquatic animals are hunted for sport.
Non-human animals have appeared in art from the earliest times and are featured in mythology and religion. The word "animal" comes from the Latin animalis, having soul or living being; the biological definition includes all members of the kingdom Animalia. In colloquial usage, as a consequence of anthropocentrism, the term animal is sometimes used nonscientifically to refer only to non-human animals. Animals have several characteristics. Animals are eukaryotic and multicellular, unlike bacteria, which are prokaryotic, unlike protists, which are eukaryotic but unicellular. Unlike plants and algae, which produce their own nutrients animals are heterotrophic, feeding on organic material and digesting it internally. With few exceptions, animals breathe oxygen and respire aerobically. All animals are motile during at least part of their life cycle, but some animals, such as sponges, corals and barnacles become sessile; the blastula is a stage in embryonic development, unique to most animals, allowing cells to be differentiated into specialised tissues and organs.
All animals are composed of cells, surrounded by a characteristic extracellular matrix composed of collagen and elastic glycoproteins. During development, the animal extracellular matrix forms a flexible framework upon which cells can move about and be reorganised, making the formation of complex structures possible; this may be calcified, forming structures such as shells and spicules. In contrast, the cells of other multicellular organisms are held in place by cell walls, so develop by progressive growth. Animal cells uniquely possess the cell junctions called tight junctions, gap junctions, desmosomes. With few exceptions—in particular, the sponges and placozoans—animal bodies are differentiated into tissues; these include muscles, which enable locomotion, nerve tissues, which transmit signals and coordinate the body. There is an internal digestive chamber with either one opening or two openings. Nearly all animals make use of some form of sexual reproduction, they produce haploid gametes by meiosis.
These fuse to form zygotes, which develop via mitosis into a hollow sphere, called a blastula. In sponges, blastula larvae swim to a new location, attach to the seabed, develop into a new sponge. In most other groups, the blastula undergoes more complicated rearrangement, it first invaginates to form a gastrula with a digestive chamber and two separate germ layers, an external ectoderm and an internal endoderm. In most cases, a third germ layer, the mesoderm develops between them; these germ layers differentiate to form tissues and organs. Repeated instances of mating with a close relative during sexual reproduction leads to inbreeding depression within a population due to the increased prevalence of harmful recessive traits. Animals have evolved numerous mechanisms for avoiding close inbreeding. In some species, such as the splendid fairywren, females benefit by mating with multiple males, thus producing more offspring of higher genetic quality; some animals are capable of asexual reproduction, which results
In biology, extinction is the termination of an organism or of a group of organisms a species. The moment of extinction is considered to be the death of the last individual of the species, although the capacity to breed and recover may have been lost before this point; because a species' potential range may be large, determining this moment is difficult, is done retrospectively. This difficulty leads to phenomena such as Lazarus taxa, where a species presumed extinct abruptly "reappears" after a period of apparent absence. More than 99 percent of all species, amounting to over five billion species, that lived on Earth are estimated to have died out. Estimates on the number of Earth's current species range from 10 million to 14 million, of which about 1.2 million have been documented and over 86 percent have not yet been described. In 2016, scientists reported that 1 trillion species are estimated to be on Earth with only one-thousandth of one percent described. Through evolution, species arise through the process of speciation—where new varieties of organisms arise and thrive when they are able to find and exploit an ecological niche—and species become extinct when they are no longer able to survive in changing conditions or against superior competition.
The relationship between animals and their ecological niches has been established. A typical species becomes extinct within 10 million years of its first appearance, although some species, called living fossils, survive with no morphological change for hundreds of millions of years. Mass extinctions are rare events. Only have extinctions been recorded and scientists have become alarmed at the current high rate of extinctions. Most species that become extinct are never scientifically documented; some scientists estimate that up to half of presently existing plant and animal species may become extinct by 2100. A 2018 report indicated that the phylogenetic diversity of 300 mammalian species erased during the human era since the Late Pleistocene would require 5 to 7 million years to recover. A dagger symbol placed next to the name of a species or other taxon indicates its status as extinct. A species is extinct. Extinction therefore becomes a certainty when there are no surviving individuals that can reproduce and create a new generation.
A species may become functionally extinct when only a handful of individuals survive, which cannot reproduce due to poor health, sparse distribution over a large range, a lack of individuals of both sexes, or other reasons. Pinpointing the extinction of a species requires a clear definition of that species. If it is to be declared extinct, the species in question must be uniquely distinguishable from any ancestor or daughter species, from any other related species. Extinction of a species plays a key role in the punctuated equilibrium hypothesis of Stephen Jay Gould and Niles Eldredge. In ecology, extinction is used informally to refer to local extinction, in which a species ceases to exist in the chosen area of study, but may still exist elsewhere; this phenomenon is known as extirpation. Local extinctions may be followed by a replacement of the species taken from other locations. Species which are not extinct are termed extant; those that are extant but threatened by extinction are referred to as threatened or endangered species.
An important aspect of extinction is human attempts to preserve critically endangered species. These are reflected by the creation of the conservation status "extinct in the wild". Species listed under this status by the International Union for Conservation of Nature are not known to have any living specimens in the wild, are maintained only in zoos or other artificial environments; some of these species are functionally extinct, as they are no longer part of their natural habitat and it is unlikely the species will be restored to the wild. When possible, modern zoological institutions try to maintain a viable population for species preservation and possible future reintroduction to the wild, through use of planned breeding programs; the extinction of one species' wild population can have knock-on effects, causing further extinctions. These are called "chains of extinction"; this is common with extinction of keystone species. A 2018 study indicated that the 6th mass extinction started in the Late Pleistocene could take up to 5 to 7 million years to restore 2.5 billion years of unique mammal diversity to what it was before the human era.
Extinction of a parent species where daughter species or subspecies are still extant is called pseudoextinction or phyletic extinction. The old taxon vanishes, transformed into a successor, or split into more than one. Pseudoextinction is difficult to demonstrate unless one has a strong chain of evidence linking a living species to members of a pre-existing species. For example, it is sometimes claimed that the extinct Hyracotherium, an early horse that shares a common ancestor with the modern horse, is pseudoextinct, rather than extinct, because there are several extant species of Equus, including zebra and donkey. However, as fossil species leave no genetic material behind, one cannot say whether Hyracotherium evolved into more modern horse species or evolved from a common ancestor with modern horses. Pseudoextinction is much easier to demonstrate for larger taxonomic groups; the coelacanth, a fish related to lungfish and tetrapods, was consi