The Estonian National Time Trial Championship is a time trial race that takes place inside the Estonian National Cycling Championship, and decides the best cyclist in this type of race. The first edition took place in 1997. The first race winner of the time trial championship was Urmo Fuchs in 1997. Jaan Kirsipuu holds the record for the most wins in the men's championship with 9, and the women's record is held by Liisi Rist with 7 wins. The current champions are husband and wife Rein Taaramäe and Hanna Taaramäe.

Jaan Kirsipuu is an Estonian former road bicycle racer, who currently works as a directeur sportif for UCI Continental team Tartu2024 Cycling team.