Brook salamander
Eurycea is a genus of salamanders native to North America. These salamanders are commonly referred to as brook salamanders, the genus Eurycea was first described by Constantine Samuel Rafinesque-Schmaltz in 1822, with a specimen of the spotted-tail salamander, Eurycea lucifuga, from Kentucky. The taxonomy of the genus is confusing, as many of the species within it are poorly studied and are only found in very restricted ranges. Several species have even been described several times by different researchers, a recent taxonomic revision moved the Georgia blind salamander to this genus, which makes Haideotriton a synonym of Eurycea. Most species are very isolated localities, so bear the name of the place the first specimen was found. This genus is composed of these 27 species, Darrel R.2007, amphibian Species of the World, an Online Reference. American Museum of Natural History, New York, USA, amphibiaWeb, Information on amphibian biology and conservation
Global Biodiversity Information Facility
The Global Biodiversity Information Facility is an international organisation that focuses on making scientific data on biodiversity available via the Internet using web services. The data are provided by institutions from around the world. Data available through the GBIF portal are primarily distribution data on plants, animals and microbes for the world, the mission of the Global Biodiversity information Facility is to facilitate free and open access to biodiversity data worldwide to underpin sustainable development. ABCD Schema Atlas of Living Australia Darwin Core Global biodiversity Pacific Biodiversity Information Forum GBIF website Short description of GBIF
IUCN Red List
The IUCN Red List of Threatened Species, founded in 1964, is the worlds most comprehensive inventory of the global conservation status of biological species. The International Union for Conservation of Nature is the main authority on the conservation status of species. A series of Regional Red Lists are produced by countries or organizations, the IUCN Red List is set upon precise criteria to evaluate the extinction risk of thousands of species and subspecies. These criteria are relevant to all species and all regions of the world, the aim is to convey the urgency of conservation issues to the public and policy makers, as well as help the international community to try to reduce species extinction. Major species assessors include BirdLife International, the Institute of Zoology, the World Conservation Monitoring Centre, assessments by these organizations and groups account for nearly half the species on the Red List. The IUCN aims to have the category of every species re-evaluated every five years if possible, the 1964 IUCN Red List of Threatened Plants used the older pre-criteria Red List assessment system.
Plants listed may not, appear in the current Red List, IUCN advise that is best to check both the online Red List and the 1997 plants Red List publication. The 2006 Red List, released on 4 May 2006 evaluated 40,168 species as a whole, plus an additional 2,160 subspecies, aquatic stocks, on 12 September 2007, the World Conservation Union released the 2007 IUCN Red List of Threatened Species. Russ Mittermeier, chief of Swiss-based IUCNs Primate Specialist Group, stated that 16,306 species are endangered with extinction,188 more than in 2006, the Red List includes the Sumatran orangutan in the Critically Endangered category and the Bornean orangutan in the Endangered category. The study shows at least 1,141 of the 5,487 mammals on Earth are known to be threatened with extinction, and 836 are listed as Data Deficient. The Red List of 2012 was released 19 July 2012 at Rio+20 Earth Summit, nearly 2,000 species were added, the IUCN assessed a total of 63,837 species which revealed 19,817 are threatened with extinction.
With 3,947 described as endangered and 5,766 as endangered. At threat are 41% of amphibian species, 33% of reef-building corals, 30% of conifers, 25% of mammals, the IUCN Red List has listed 132 species of plants and animals from India as Critically Endangered. Extinct – No known individuals remaining, extinct in the wild – Known only to survive in captivity, or as a naturalized population outside its historic range. Critically endangered – Extremely high risk of extinction in the wild, Endangered – High risk of extinction in the wild. Vulnerable – High risk of endangerment in the wild, near threatened – Likely to become endangered in the near future. Does not qualify for a more at-risk category and abundant taxa are included in this category. Data deficient – Not enough data to make an assessment of its risk of extinction, Not evaluated – Has not yet been evaluated against the criteria
Alabama
Alabama is a state in the southeastern region of the United States. It is bordered by Tennessee to the north, Georgia to the east and the Gulf of Mexico to the south, Alabama is the 30th-most extensive and the 24th-most populous of the U. S. states. At nearly 1,500 miles, Alabama has one of the nations longest navigable inland waterways, Alabama is nicknamed the Yellowhammer State, after the state bird. Alabama is known as the Heart of Dixie and the Cotton State, the state tree is the longleaf pine, and the state flower is the camellia. The largest city by population is Birmingham, which has long been the most industrialized city, the oldest city is Mobile, founded by French colonists in 1702 as the capital of French Louisiana. From the American Civil War until World War II, like many states in the southern U. S. suffered economic hardship, like other southern states, Alabama legislators disenfranchised African Americans and many poor whites at the turn of the century. Following World War II, Alabama grew as the economy changed from one primarily based on agriculture to one with diversified interests.
The state economy in the 21st century is based on management, finance, aerospace, mineral extraction, education, retail, in the Alabama language, the word for a person of Alabama lineage is Albaamo. The word Alabama is believed to have come from the Alabama language, the words spelling varies significantly among historical sources. As early as 1702, the French called the tribe the Alibamon, other spellings of the name have included Alibamu, Albama, Alibama, Alabamu, Allibamou. Sources disagree on the words meaning, some scholars suggest the word comes from the Choctaw alba and amo. The meaning may have been clearers of the thicket or herb gatherers, the state has numerous place names of Native American origin. However, there are no correspondingly similar words in the Alabama language, an 1842 article in the Jacksonville Republican proposed it meant Here We Rest. This notion was popularized in the 1850s through the writings of Alexander Beaufort Meek, experts in the Muskogean languages have not found any evidence to support such a translation.
Indigenous peoples of varying cultures lived in the area for thousands of years before the advent of European colonization, trade with the northeastern tribes by the Ohio River began during the Burial Mound Period and continued until European contact. The agrarian Mississippian culture covered most of the state from 1000 to 1600 AD, with one of its major centers built at what is now the Moundville Archaeological Site in Moundville, Alabama. This is the second-largest complex of the classic Middle Mississippian era, after Cahokia in present-day Illinois, Analysis of artifacts from archaeological excavations at Moundville were the basis of scholars formulating the characteristics of the Southeastern Ceremonial Complex. Contrary to popular belief, the SECC appears to have no links to Mesoamerican culture
Cave salamander
Several salamanders that primarily or exclusively inhabit caves have commonly been termed cave salamanders. Some of these animals have developed special, even extreme, adaptations to their subterranean environments and these adaptations include rudimentary eyes—thus the related term blind salamanders—or absence of pigmentation, rendering them a pale yellowish or pinkish color. With the highly notable exception of Proteus anguinus, all cave salamanders are members of the family Plethodontidae, the first dedicated scientific study of a cave animal was focused upon a cave salamander, Proteus anguinus. It was originally identified as a larva by Johann Weikhard von Valvasor in 1689. Later, the Austrian naturalist Joseph Nicolaus Lorenz described it scientifically in 1768, the species he described was known to the locals as a cave puppet and is now known to be Eurycea lucifuga. His discovery was not surprising at the time because E. lucifuga inhabits near the entrance of caves, thus an in-depth exploration was not required, and, E. lucifuga is neither blind nor depigmented
Illinois
Illinois is a state in the midwestern region of the United States, achieving statehood in 1818. It is the 6th most populous state and 25th largest state in terms of land area, the word Illinois comes from a French rendering of a native Algonquin word. For decades, OHare International Airport has been ranked as one of the worlds busiest airports, Illinois has long had a reputation as a bellwether both in social and cultural terms and politics. With the War of 1812 Illinois growth slowed as both Native Americans and Canadian forces often raided the American Frontier, mineral finds and timber stands had spurred immigration—by the 1810s, the Eastern U. S. Railroads arose and matured in the 1840s, and soon carried immigrants to new homes in Illinois, as well as being a resource to ship their commodity crops out to markets. Railroads freed most of the land of Illinois and other states from the tyranny of water transport. By 1900, the growth of jobs in the northern cities and coal mining in the central and southern areas attracted a new group of immigrants.
Illinois was an important manufacturing center during both world wars, the Great Migration from the South established a large community of African Americans in Chicago, who created the citys famous jazz and blues cultures. Three U. S. presidents have been elected while living in Illinois, Abraham Lincoln, Ulysses S. Grant, Ronald Reagan, whose political career was based in California, was the only U. S. president born and raised in Illinois. Today, Illinois honors Lincoln with its official slogan, Land of Lincoln. The Abraham Lincoln Presidential Library and Museum is located in the capital of Springfield. Illinois is the spelling for the early French Catholic missionaries and explorers name for the Illinois Native Americans. American scholars previously thought the name Illinois meant man or men in the Miami-Illinois language and this etymology is not supported by the Illinois language, as the word for man is ireniwa and plural men is ireniwaki. The name Illiniwek has said to mean tribe of superior men.
The name Illinois derives from the Miami-Illinois verb irenwe·wa he speaks the regular way and this was taken into the Ojibwe language, perhaps in the Ottawa dialect, and modified into ilinwe·. The French borrowed these forms, changing the ending to spell it as -ois. The current spelling form, began to appear in the early 1670s, the Illinois name for themselves, as attested in all three of the French missionary-period dictionaries of Illinois, was Inoka, of unknown meaning and unrelated to the other terms. American Indians of successive cultures lived along the waterways of the Illinois area for thousands of years before the arrival of Europeans, the Koster Site has been excavated and demonstrates 7,000 years of continuous habitation
Chordate
Chordates are deuterostomes, as during the embryo development stage the anus forms before the mouth. They are bilaterally symmetric coelomates, in the case of vertebrate chordates, the notochord is usually replaced by a vertebral column during development, and they may have body plans organized via segmentation. There are additional extinct taxa, the Vertebrata are sometimes considered as a subgroup of the clade Craniata, consisting of chordates with a skull, the Craniata and Tunicata compose the clade Olfactores. Of the more than 65,000 living species of chordates, the worlds largest and fastest animals, the blue whale and peregrine falcon respectively, are chordates, as are humans. Fossil chordates are known from at least as early as the Cambrian explosion, which includes the acorn worms, has been presented as a fourth chordate subphylum, but it now is usually treated as a separate phylum. The Hemichordata, along with the Echinodermata, form the Ambulacraria, the Chordata and Ambulacraria form the superphylum Deuterostomia, composed of the deuterostomes.
Attempts to work out the relationships of the chordates have produced several hypotheses. All of the earliest chordate fossils have found in the Early Cambrian Chengjiang fauna. Because the fossil record of early chordates is poor, only molecular phylogenetics offers a prospect of dating their emergence. However, the use of molecular phylogenetics for dating evolutionary transitions is controversial and it has proved difficult to produce a detailed classification within the living chordates. Attempts to produce family trees shows that many of the traditional classes are paraphyletic. While this has been known since the 19th century, an insistence on only monophyletic taxa has resulted in vertebrate classification being in a state of flux. Although the name Chordata is attributed to William Bateson, it was already in prevalent use by 1880, ernst Haeckel described a taxon comprising tunicates and vertebrates in 1866. Though he used the German vernacular form, it is allowed under the ICZN code because of its subsequent latinization, among the vertebrate sub-group of chordates the notochord develops into the spine, and in wholly aquatic species this helps the animal to swim by flexing its tail.
In fish and other vertebrates, this develops into the spinal cord, the pharynx is the part of the throat immediately behind the mouth. In fish, the slits are modified to form gills, a muscular tail that extends backwards behind the anus. This is a groove in the wall of the pharynx. In filter-feeding species it produces mucus to gather food particles, which helps in transporting food to the esophagus and it stores iodine, and may be a precursor of the vertebrate thyroid gland
Missouri
Missouri is a state in the Midwestern region of the United States, achieving statehood in 1821. With over six million residents, it is the eighteenth most populous state, the largest urban areas are St. Louis, Kansas City and Columbia. The capitol is in Jefferson City on the Missouri River, the state is the twenty-first most extensive by area and is geographically diverse. The Northern Plains were once covered by glaciers, tallgrass prairie, in the South are the Ozarks, a forested highland, providing timber and recreation. The Mississippi River forms the border of the state, eventually flowing into the swampy Missouri Bootheel. Humans have inhabited the land now known as Missouri for at least 12,000 years, the Mississippian culture built cities and mounds, before declining in the 1300s. When European explorers arrived in the 1600s they encountered the Osage, the French established Louisiana, a part of New France, and founded Ste. Genevieve in 1735 and St. Louis in 1764, after a brief period of Spanish rule, the United States acquired the Louisiana Purchase in 1803.
Americans from the Upland South, including enslaved African Americans, rushed into the new Missouri Territory, many from Virginia and Tennessee settled in the Boonslick area of Mid-Missouri. Soon after, heavy German immigration formed the Missouri Rhineland, Missouri played a central role in the westward expansion of the United States, as memorialized by the Gateway Arch. The Pony Express, Oregon Trail, Santa Fe Trail, as a border state, Missouris role in the American Civil War was complex and there were many conflicts within. After the war, both Greater St. Louis and the Kansas City metropolitan area became centers of industrialization and business, the state is divided into 114 counties and the independent city of St. Louis. Missouris culture blends elements from the Midwestern and Southern United States, the musical styles of ragtime, Kansas City jazz, and St. Louis Blues, developed in Missouri. The well-known Kansas City-style barbecue, and lesser known St. Louis-style barbecue can be found across the state, St.
Louis is a major center of beer brewing, Anheuser-Busch is the largest producer in the world. Missouri wine is produced in the nearby Missouri Rhineland and Ozarks, Missouris alcohol laws are among the most permissive in the United States. Outside of the large cities popular tourist destinations include the Lake of the Ozarks, U. S. President Harry S. Truman is from Missouri. Other well known Missourians include Mark Twain, Walt Disney, Chuck Berry, some of the largest companies based in the state include Express Scripts, Emerson Electric, Edward Jones, and OReilly Auto Parts. Missouri has been called the Mother of the West and the Cave State, Missouris most famous nickname is the Show Me State, the state is named for the Missouri River, which was named after the indigenous Missouri Indians, a Siouan-language tribe
National Center for Biotechnology Information
The National Center for Biotechnology Information is part of the United States National Library of Medicine, a branch of the National Institutes of Health. The NCBI is located in Bethesda and was founded in 1988 through legislation sponsored by Senator Claude Pepper, the NCBI houses a series of databases relevant to biotechnology and biomedicine and is an important resource for bioinformatics tools and services. Major databases include GenBank for DNA sequences and PubMed, a database for the biomedical literature. Other databases include the NCBI Epigenomics database, all these databases are available online through the Entrez search engine. NCBI is directed by David Lipman, one of the authors of the BLAST sequence alignment program. He leads a research program, including groups led by Stephen Altschul, David Landsman, Eugene Koonin, John Wilbur, Teresa Przytycka. NCBI is listed in the Registry of Research Data Repositories re3data. org, NCBI has had responsibility for making available the GenBank DNA sequence database since 1992.
GenBank coordinates with individual laboratories and other databases such as those of the European Molecular Biology Laboratory. Since 1992, NCBI has grown to other databases in addition to GenBank. The NCBI assigns a unique identifier to each species of organism, the NCBI has software tools that are available by WWW browsing or by FTP. For example, BLAST is a sequence similarity searching program, BLAST can do sequence comparisons against the GenBank DNA database in less than 15 seconds. RAG2/IL2RG The NCBI Bookshelf is a collection of freely accessible, some of the books are online versions of previously published books, while others, such as Coffee Break, are written and edited by NCBI staff. BLAST is a used for calculating sequence similarity between biological sequences such as nucleotide sequences of DNA and amino acid sequences of proteins. BLAST is a tool for finding sequences similar to the query sequence within the same organism or in different organisms. It searches the query sequence on NCBI databases and servers and post the results back to the browser in chosen format.
Input sequences to the BLAST are mostly in FASTA or Genbank format while output could be delivered in variety of such as HTML, XML formatting. HTML is the output format for NCBIs web-page. Entrez is both indexing and retrieval system having data from sources for biomedical research
INaturalist
Observations may be added via the website or from a mobile application. The observations provide valuable data to a variety of scientific research projects, botanic gardens, parks. Users of iNaturalist have contributed four million observations since its founding in 2008. INaturalist. org began in 2008 as a UC Berkeley School of Information Masters final project of Nate Agrin, Jessica Kline, Nate Agrin and Ken-ichi Ueda continued work on the site with Sean McGregor, a web developer. In 2011, Ueda began collaboration with Scott Loarie, a fellow at Stanford University. Ueda and Loarie are the current co-directors of iNaturalist. org, on April 24,2014 iNaturalist. org merged with the California Academy of Sciences In 2014, iNaturalist celebrated its one millionth observation. The iNaturalist platform is based on crowdsourcing of data, users of iNaturalist can submit observations of organisms in the form of photographs, sound recordings, or visual sightings. Observations are either casual or research grade, and research grade observations are incorporated into online databases to be utilizable for scientists, iNaturalist is the preferred application for crowd-sourced biodiversity data in Mexico.
As of 28 January 2017, the iNaturalist community consisted of almost 400,000 users contributing over 4,300,000 observations of plants, users have created and contributed to over 9000 different projects, spanning hundreds of themes. Project examples include taxa- and location-specific bioblitzes, roadkill observations, animal tracks, the US National Park Service partnered with iNaturalist to record observations from the 2016 National Parks BioBlitz. That project exceeded 100,000 observations in August 2016, list of citizen science projects Official website iNaturalist on Vimeo Introducing iNaturalist by Suzanne Cadwell
Encyclopedia of Life
The Encyclopedia of Life is a free, online collaborative encyclopedia intended to document all of the 1.9 million living species known to science. It is compiled from existing databases and from contributions by experts and non-experts throughout the world and it aims to build one infinitely expandable page for each species, including video, images, graphics, as well as text. In addition, the Encyclopedia incorporates content from the Biodiversity Heritage Library, the project was initially backed by a US$50 million funding commitment, led by the MacArthur Foundation and the Sloan Foundation, who provided US$20 million and US$5 million, respectively. The project was led by Jim Edwards and the development team by David Patterson. Today, participating institutions and individual donors continue to support EOL through financial contributions, EOL went live on 26 February 2008 with 30,000 entries. The site immediately proved to be popular, and temporarily had to revert to demonstration pages for two days when it was overrun by traffic from over 11 million views it received.
The site relaunched on 5 September 2011 with a redesigned interface, eOLv2 is redesigned to enhance usability and encourage contributions and interactions among users. The product is internationalized with interfaces provided for English, Spanish, Galician, Macedonian, Chinese and Ukrainian language speakers. On 16 January 2014, EOL launched TraitBank, a searchable, open digital repository for organism traits, interactions, information about many species is already available from a variety of sources, in particular about the megafauna. Gathering currently available data on all 1.9 million species will take about 10 years, as of September 2011, EOL had information on more than 700,000 species available, along with more than 600,000 photos and millions of pages of scanned literature. The initial focus has been on living species but will include extinct species, as the discovery of new species is expected to continue, the encyclopedia will grow continuously. The goal of EOL is to serve as a resource for the public, enthusiastic amateurs, students.
The Encyclopedia of Life has content partners around the world who share information through the EOL platform, including Wikipedia and its interface is translated at translatewiki. net. The Encyclopedia of Life – Introductory video on YouTube from May 2007
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